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CRYSTAL STRUCTURE OF LXRbeta (NUCLEAR RECEPTOR SUBFAMILY 1, GROUP H, MEMBER 2) COMPLEXED WITH BMS-852927
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 298
Crystal Properties Matthews coefficient Solvent content 2.4 48.83
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 183.66 α = 90 b = 120.35 β = 107.49 c = 55.72 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2008-10-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL9-1 1.0 SSRL BL9-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 99.01 96.7 0.182 8.3 7.5 56715 -3 56.857
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.4 91.2 2.01 1.15 12200
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.4 99.01 41043 3466 98.5 0.2288 0.2254 0.2193 0.2678 0.2407 RANDOM 50.431
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.92 -1.07 2.1 -0.82
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.134 r_dihedral_angle_3_deg 23.421 r_dihedral_angle_4_deg 21.654 r_dihedral_angle_1_deg 7.761 r_scangle_it 5.141 r_scbond_it 3.363 r_angle_refined_deg 2.443 r_mcangle_it 2.132 r_mcbond_it 1.343 r_xyhbond_nbd_refined 0.374
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.134 r_dihedral_angle_3_deg 23.421 r_dihedral_angle_4_deg 21.654 r_dihedral_angle_1_deg 7.761 r_scangle_it 5.141 r_scbond_it 3.363 r_angle_refined_deg 2.443 r_mcangle_it 2.132 r_mcbond_it 1.343 r_xyhbond_nbd_refined 0.374 r_nbtor_refined 0.32 r_symmetry_vdw_refined 0.313 r_nbd_refined 0.268 r_chiral_restr 0.171 r_symmetry_hbond_refined 0.142 r_bond_refined_d 0.026 r_gen_planes_refined 0.01
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7462 Nucleic Acid Atoms Solvent Atoms 150 Heterogen Atoms 172
Software Software Software Name Purpose XSCALE data scaling REFMAC refinement PDB_EXTRACT data extraction XDS data reduction