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Solution NMR structure of PT-free dsDNA from Streptomyces lividans
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 1.0 mM PT-free dsDNA, 100 mM NaCl, 40 mM NaPO4 90% H2O/10% D2O 360 mM 7.0 1.0 atm 298 Agilent DD2 600 2 2D 1H-1H TOCSY 1.0 mM PT-free dsDNA, 100 mM NaCl, 40 mM NaPO4 90% H2O/10% D2O 360 mM 7.0 1 atm 298 Agilent DD2 600 3 2D DQF-COSY 1.0 mM PT-free dsDNA, 100 mM NaCl, 40 mM NaPO4 90% H2O/10% D2O 360 mM 7.0 1 atm 298 Agilent DD2 600 4 2D NOESY 1.0 mM PT-free dsDNA, 100 mM NaCl, 40 mM NaPO4 90% H2O/10% D2O 360 mM 7.0 1 atm 298 Agilent DD2 600 5 2D 1H-31P hetcor 1.0 mM PT-free dsDNA, 100 mM NaCl, 40 mM NaPO4 90% H2O/10% D2O 360 mM 7.0 1 atm 298 Agilent DD2 500
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Agilent DD2 600 2 Agilent DD2 500
NMR Refinement Method Details Software simulated annealing X-PLOR NIH
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRDraw Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 structure calculation X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore 3 chemical shift assignment Sparky Goddard