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Structure of Adeno-associated virus type 2 VLP
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 9.12 f_angle_d 1.05 f_chiral_restr 0.05 f_bond_d 0.01 f_plane_restr 0.007
Sample Adeno-associated virus - 2
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument HOMEMADE PLUNGER Cryogen Name ETHANE Sample Vitrification Details Grid was blotted for 5-6 seconds before plunge freezing.
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 23039 Reported Resolution (Å) 3.8 Resolution Method FSC 0.5 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type KODAK SO-163 FILM Electron Dose (electrons/Å**2) 20
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI POLARA 300 Minimum Defocus (nm) 1100 Maximum Defocus (nm) 3700 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.26 Imaging Mode BRIGHT FIELD Specimen Holder Model OTHER Nominal Magnification 59000 Calibrated Magnification 56924 Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION RobEM v4.0 CTF CORRECTION CTFFIND V3 RECONSTRUCTION Auto3DEM v4.05 MODEL REFINEMENT PHENIX
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING ONLY 23039