☰ Navigation Tabs
Structure of TRiC-AMP-PNP
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 5.195 f_angle_d 0.416 f_chiral_restr 0.039 f_bond_d 0.002 f_plane_restr 0.002
Sample Yeast TRiC-AMP-PNP Sample Components T-complex protein 1 subunit alpha T-complex protein 1 subunit beta T-complex protein 1 subunit delta T-complex protein 1 subunit epsilon T-complex protein 1 subunit gamma T-complex protein 1 subunit eta T-complex protein 1 subunit theta T-complex protein 1 subunit zeta
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details blot for 3 seconds before plunging
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 67990 Reported Resolution (Å) 4.6 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol FLEXIBLE FIT Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K2 SUMMIT (4k x 4k) Electron Dose (electrons/Å**2) 38
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TITAN KRIOS Minimum Defocus (nm) 1500 Maximum Defocus (nm) 3000 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 0.005 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification 18000 Calibrated Magnification 18000 Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION RELION 1.3 PARTICLE SELECTION EMAN 2.0 IMAGE ACQUISITION SerialEM CTF CORRECTION CTFFIND 3 MODEL FITTING UCSF Chimera 1.10.2 MODEL REFINEMENT Rosetta MODEL REFINEMENT Coot 0.8.2
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 126441