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Toscana Virus Nucleocapsid Protein
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 4CSG PDB MODEL 4CSG
Crystallization Crystal Properties Matthews coefficient Solvent content 2.31 46.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 174.615 α = 90 b = 174.615 β = 90 c = 89.824 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 PIXEL EIGER 4M 2015-01-30 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE MASSIF-3 ESRF MASSIF-3
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.7 48.22 100 0.21 10.48 9.5 18291 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.6 3.73 100 1.23 1.99 9.6
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB MODEL 4CSG 3.7 48.222 1.36 32686 3277 99.99 0.2341 0.2281 0.2266 0.2714 0.2717
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 13.075 f_angle_d 1.477 f_chiral_restr 0.057 f_plane_restr 0.009 f_bond_d 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 9617 Nucleic Acid Atoms Solvent Atoms 3 Heterogen Atoms 5
Software Software Software Name Purpose PHENIX refinement PHENIX phasing