☰ Navigation Tabs
Crystal Structure of Human Complement C3b in Complex with CR1 (CCP15- 17)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2I07 PDB ENTRIES 2I07, 1GKN, 1GKG experimental model PDB 1GKN PDB ENTRIES 2I07, 1GKN, 1GKG experimental model PDB 1GKG PDB ENTRIES 2I07, 1GKN, 1GKG
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8% PEG 3350 35MM BIS-TRIS PH 5.5
Crystal Properties Matthews coefficient Solvent content 4.27 71.2
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 104.32 α = 82.74 b = 113.71 β = 71.77 c = 138.52 γ = 80.95
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.3 60.15 98.4 0.16 3.8 1.9 88061 1.5 74.36
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.3 3.48 98.2 0.62 1.4 1.9
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRIES 2I07, 1GKN, 1GKG 3.3 60.153 1.96 88022 4423 98.37 0.2525 0.2505 0.2529 0.2913 0.2902 143
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 12.964 f_angle_d 0.829 f_chiral_restr 0.056 f_plane_restr 0.004 f_bond_d 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 27378 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 28
Software Software Software Name Purpose PHENIX refinement iMOSFLM data reduction SCALA data scaling PHASER phasing