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Structure of a human aspartate kinase, chorismate mutase and TyrA domain.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 25% PEG 3350, 0.20M NACL, 0.1M BIS-TRIS PH 5.5
Crystal Properties Matthews coefficient Solvent content 2.24 77
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 36.14 α = 98.94 b = 37.41 β = 103.84 c = 64.08 γ = 94.79
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 2014-05-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I03 Diamond I03
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 34.81 91.1 0.06 12 1.7 28770 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.85 90.5 0.5 2.1 1.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT NONE 1.8 34.81 27405 1365 97.16 0.17921 0.17701 0.1869 0.22178 0.2319 RANDOM 27.57
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.88 1.09 0.27 -1.37 -0.04 -1.5
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.419 r_dihedral_angle_4_deg 21.798 r_dihedral_angle_3_deg 13.301 r_dihedral_angle_1_deg 6.424 r_mcangle_it 2.66 r_scbond_it 2.357 r_mcbond_other 1.727 r_mcbond_it 1.726 r_angle_refined_deg 1.436 r_angle_other_deg 0.906
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.419 r_dihedral_angle_4_deg 21.798 r_dihedral_angle_3_deg 13.301 r_dihedral_angle_1_deg 6.424 r_mcangle_it 2.66 r_scbond_it 2.357 r_mcbond_other 1.727 r_mcbond_it 1.726 r_angle_refined_deg 1.436 r_angle_other_deg 0.906 r_chiral_restr 0.082 r_bond_refined_d 0.01 r_gen_planes_refined 0.006 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2432 Nucleic Acid Atoms Solvent Atoms 263 Heterogen Atoms 48
Software Software Software Name Purpose REFMAC refinement Rosetta phasing