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Salicylate hydroxylase substrate complex
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8.5 293 ammonium sulfate, lithium sulfate, Tris-HCl
Crystal Properties Matthews coefficient Solvent content 3.85 68.08
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 142.33 α = 90 b = 142.33 β = 90 c = 62.35 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD BRUKER SMART 6500 2015-01-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL44XU 0.9 SPring-8 BL44XU
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.47 43.83 100 0.105 12 9.6 26083
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.47 2.6 100 2.2 7.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.47 37.32 24736 1324 99.95 0.20385 0.20084 0.2059 0.26017 0.2633 RANDOM 66.152
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.02 -0.01 -0.02 0.05
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.915 r_dihedral_angle_4_deg 18.367 r_dihedral_angle_3_deg 17.996 r_long_range_B_refined 12.044 r_long_range_B_other 12.04 r_scangle_other 8.274 r_dihedral_angle_1_deg 7.862 r_mcangle_it 7.704 r_mcangle_other 7.703 r_scbond_it 5.439
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.915 r_dihedral_angle_4_deg 18.367 r_dihedral_angle_3_deg 17.996 r_long_range_B_refined 12.044 r_long_range_B_other 12.04 r_scangle_other 8.274 r_dihedral_angle_1_deg 7.862 r_mcangle_it 7.704 r_mcangle_other 7.703 r_scbond_it 5.439 r_scbond_other 5.428 r_mcbond_it 5.244 r_mcbond_other 5.236 r_angle_refined_deg 1.757 r_angle_other_deg 0.876 r_chiral_restr 0.094 r_bond_refined_d 0.014 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3119 Nucleic Acid Atoms Solvent Atoms 68 Heterogen Atoms 53
Software Software Software Name Purpose REFMAC refinement Coot model building MOSFLM data collection SCALA data scaling