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Crystal Structure of human Tankyrase-1 bound to K-756
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5.8 298 0.1M Na-Succinate pH 5.8, 6% PEG MME 5000
Crystal Properties Matthews coefficient Solvent content 2.14 42.57
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 158.846 α = 90 b = 74.68 β = 90 c = 84.603 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2011-01-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PHOTON FACTORY BEAMLINE BL-5A 1.0000 Photon Factory BL-5A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.9 50 93.8 0.137 7.8 3.9 21422
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.9 3 89.1 0.87 3.7 1990
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.9 50 20069 1098 91.83 0.2576 0.255 0.2574 0.3054 0.2993 RANDOM 55.05
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.38 0.63 0.75
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.703 r_dihedral_angle_3_deg 17.56 r_dihedral_angle_4_deg 15.315 r_dihedral_angle_1_deg 6.767 r_mcangle_it 2.3 r_angle_refined_deg 1.491 r_mcbond_it 1.308 r_mcbond_other 1.308 r_angle_other_deg 1.079 r_chiral_restr 0.1
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.703 r_dihedral_angle_3_deg 17.56 r_dihedral_angle_4_deg 15.315 r_dihedral_angle_1_deg 6.767 r_mcangle_it 2.3 r_angle_refined_deg 1.491 r_mcbond_it 1.308 r_mcbond_other 1.308 r_angle_other_deg 1.079 r_chiral_restr 0.1 r_bond_refined_d 0.011 r_gen_planes_refined 0.008 r_bond_other_d 0.005 r_gen_planes_other 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6571 Nucleic Acid Atoms Solvent Atoms 74 Heterogen Atoms 132
Software Software Software Name Purpose HKL-2000 data scaling REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data reduction PHASER phasing