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Ketosynthase from module 6 of the bacillaene synthase from Bacillus subtilis 168 (C167S mutant, crystal form 2)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 298 15 mg/ml protein in 150 mM NaCl and 20 mM HEPES pH 7.5 mixed with 1.7 M LiSO4 and 100 mM Tris pH 8
Crystal Properties Matthews coefficient Solvent content 2.59 52.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 76.609 α = 90 b = 105.448 β = 96.76 c = 89.332 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL PSI PILATUS 6M 2013-11-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 23-ID-D 1 APS 23-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.16 36.55 93.5 2 1.9 71285
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.16 36.55 71285 3769 99.2 0.22234 0.22063 0.25441 0.2678 RANDOM 41.723
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.01 0.01 0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.521 r_dihedral_angle_4_deg 18.434 r_dihedral_angle_3_deg 15.888 r_long_range_B_refined 8.623 r_long_range_B_other 8.623 r_dihedral_angle_1_deg 7.052 r_scangle_other 6.272 r_mcangle_it 5.208 r_mcangle_other 5.207 r_scbond_it 4.111
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.521 r_dihedral_angle_4_deg 18.434 r_dihedral_angle_3_deg 15.888 r_long_range_B_refined 8.623 r_long_range_B_other 8.623 r_dihedral_angle_1_deg 7.052 r_scangle_other 6.272 r_mcangle_it 5.208 r_mcangle_other 5.207 r_scbond_it 4.111 r_scbond_other 4.109 r_angle_other_deg 3.547 r_mcbond_it 3.543 r_mcbond_other 3.543 r_angle_refined_deg 1.377 r_chiral_restr 0.083 r_gen_planes_other 0.015 r_gen_planes_refined 0.011 r_bond_refined_d 0.009 r_bond_other_d r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8320 Nucleic Acid Atoms Solvent Atoms 68 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling PHASER phasing