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Crystal structure of CARM1, sinefungin, and H3 peptide (R17)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 291 0.2 M Ammonium Sulfate, 0.1 M Tris pH 8.5, 18% w/v PEG 3350
Crystal Properties Matthews coefficient Solvent content 2.44 49.56
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 75.722 α = 90 b = 98.847 β = 90 c = 208.67 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2014-09-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRF BEAMLINE BL17U 0.97915 SSRF BL17U
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.05 50 89.9 0.079 0.092 0.046 6.8 3.5 88915
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.05 2.12 89.9 0.644 0.747 0.374 0.83 3.6 8778
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.05 50 84566 4324 89.75 0.2137 0.2111 0.2632 0.2564 RANDOM 34.821
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.39 -2.39
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.086 r_dihedral_angle_4_deg 16.635 r_dihedral_angle_3_deg 13.845 r_dihedral_angle_1_deg 6.312 r_mcangle_it 2.734 r_mcbond_it 1.829 r_mcbond_other 1.828 r_angle_refined_deg 1.376 r_angle_other_deg 0.764 r_chiral_restr 0.078
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.086 r_dihedral_angle_4_deg 16.635 r_dihedral_angle_3_deg 13.845 r_dihedral_angle_1_deg 6.312 r_mcangle_it 2.734 r_mcbond_it 1.829 r_mcbond_other 1.828 r_angle_refined_deg 1.376 r_angle_other_deg 0.764 r_chiral_restr 0.078 r_bond_refined_d 0.01 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 11274 Nucleic Acid Atoms Solvent Atoms 458 Heterogen Atoms 140
Software Software Software Name Purpose HKL-2000 data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction