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Crystal structure of rsFolder in the non-fluorescent off-state
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2B3P
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 293 0.1 M Tris, 20% PEG3350
Crystal Properties Matthews coefficient Solvent content 2.27 45.83
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 141.29 α = 90 b = 134.8 β = 105.58 c = 51.05 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2014-05-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 0.992 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.35 95.77 98.07 0.104 10.1 4 37525
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.35 2.43 88.56 2.2 4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2B3P 2.35 95.77 35647 1877 98.06 0.21075 0.20832 0.2158 0.25734 0.2616 RANDOM 41.456
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.04 0.02 -0.05
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.782 r_dihedral_angle_3_deg 15.694 r_dihedral_angle_4_deg 14.509 r_long_range_B_other 9.071 r_long_range_B_refined 9.069 r_dihedral_angle_1_deg 8.424 r_scangle_other 6.722 r_mcangle_it 4.964 r_mcangle_other 4.964 r_scbond_it 4.291
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.782 r_dihedral_angle_3_deg 15.694 r_dihedral_angle_4_deg 14.509 r_long_range_B_other 9.071 r_long_range_B_refined 9.069 r_dihedral_angle_1_deg 8.424 r_scangle_other 6.722 r_mcangle_it 4.964 r_mcangle_other 4.964 r_scbond_it 4.291 r_scbond_other 4.29 r_mcbond_other 3.429 r_mcbond_it 3.428 r_angle_other_deg 1.825 r_angle_refined_deg 1.054 r_chiral_restr 0.061 r_gen_planes_refined 0.009 r_gen_planes_other 0.009 r_bond_refined_d 0.006 r_bond_other_d 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7261 Nucleic Acid Atoms Solvent Atoms 206 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling PHASER phasing