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Solution of the Variably-Twinned Structure of a Novel Calmodulin-Peptide Complex in a Novel Configuration
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 298 ammonium sulfate, lithium sulfate, Tris/HEPES
Crystal Properties Matthews coefficient Solvent content 2.36 47.93
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 98.874 α = 90 b = 98.874 β = 90 c = 128.583 γ = 120
Symmetry Space Group P 32 1 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RIGAKU SATURN 944 Varimax CuHF 2015-01-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 HF 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 22.81 96.5 0.107 0.021 0.998 22.1 21.5 76360
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.7 1.73 67.6 0.333 2.9 3.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.7 22.81 72624 3697 96.42 0.09928 0.09711 0.1041 0.14078 0.1425 RANDOM 21.167
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.82 -0.82 1.65
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.531 r_sphericity_free 29.292 r_dihedral_angle_4_deg 15.348 r_dihedral_angle_3_deg 11.97 r_sphericity_bonded 9.592 r_rigid_bond_restr 6.113 r_dihedral_angle_1_deg 4.709 r_long_range_B_refined 4.494 r_long_range_B_other 3.47 r_scangle_other 2.285
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.531 r_sphericity_free 29.292 r_dihedral_angle_4_deg 15.348 r_dihedral_angle_3_deg 11.97 r_sphericity_bonded 9.592 r_rigid_bond_restr 6.113 r_dihedral_angle_1_deg 4.709 r_long_range_B_refined 4.494 r_long_range_B_other 3.47 r_scangle_other 2.285 r_mcangle_it 1.969 r_mcangle_other 1.968 r_scbond_it 1.812 r_scbond_other 1.793 r_mcbond_it 1.571 r_mcbond_other 1.57 r_angle_refined_deg 1.209 r_angle_other_deg 0.808 r_chiral_restr 0.073 r_bond_refined_d 0.009 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5313 Nucleic Acid Atoms Solvent Atoms 1094 Heterogen Atoms 42
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction Aimless data scaling PHASER phasing PDB_EXTRACT data extraction