☰ Navigation Tabs
IsdB NEAT2 bound by D4-30
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 MICROBATCH 290 15% PEG10k
0.1M Tris pH 8
Crystal Properties Matthews coefficient Solvent content 2.98 58.67
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 111.251 α = 90 b = 111.251 β = 90 c = 105.226 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 90 CCD ADSC QUANTUM 315 2014-07-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 5.0.2 0.987 ALS 5.0.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.21 49.79 99 9.1 3.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 3.21 49.18 19661 1208 98.96 0.27138 0.26903 0.30996 0.2952 RANDOM 87.022
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.09 0.09 -0.18
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.257 r_dihedral_angle_4_deg 16.832 r_dihedral_angle_3_deg 16.242 r_dihedral_angle_1_deg 6.757 r_angle_refined_deg 1.465 r_angle_other_deg 0.998 r_long_range_B_refined 0.468 r_long_range_B_other 0.468 r_mcangle_it 0.322 r_mcangle_other 0.322
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.257 r_dihedral_angle_4_deg 16.832 r_dihedral_angle_3_deg 16.242 r_dihedral_angle_1_deg 6.757 r_angle_refined_deg 1.465 r_angle_other_deg 0.998 r_long_range_B_refined 0.468 r_long_range_B_other 0.468 r_mcangle_it 0.322 r_mcangle_other 0.322 r_scangle_other 0.282 r_mcbond_it 0.193 r_mcbond_other 0.193 r_scbond_it 0.173 r_scbond_other 0.173 r_chiral_restr 0.088 r_bond_refined_d 0.009 r_gen_planes_refined 0.006 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6684 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement SCALA data scaling HKL-2000 data reduction PHASER phasing