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Crystal structure of domains AC1-AC2 of yeast acetyl-CoA carboxylase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.4 293 90 mM Bis-tris propane and 60 mM citric acid, and 20% (w/v) PEG3350
Crystal Properties Matthews coefficient Solvent content 2.75 55.25
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 117.619 α = 90 b = 117.619 β = 90 c = 73.856 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2013-04-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X29A 1.075 NSLS X29A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 50 99.7 0.071 13.8 4.2 20265
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.5 2.59 99.4 0.416 2.6 3.6 2001
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.5 34.14 17154 1036 99.61 0.2151 0.212 0.21 0.2709 0.2623 RANDOM 76.687
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.08 -0.04 -0.08 0.26
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.122 r_dihedral_angle_4_deg 15.544 r_dihedral_angle_3_deg 15.131 r_mcangle_it 7.545 r_mcbond_it 5.244 r_mcbond_other 5.242 r_dihedral_angle_1_deg 4.726 r_angle_refined_deg 1.447 r_angle_other_deg 0.797 r_chiral_restr 0.07
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.122 r_dihedral_angle_4_deg 15.544 r_dihedral_angle_3_deg 15.131 r_mcangle_it 7.545 r_mcbond_it 5.244 r_mcbond_other 5.242 r_dihedral_angle_1_deg 4.726 r_angle_refined_deg 1.447 r_angle_other_deg 0.797 r_chiral_restr 0.07 r_bond_refined_d 0.012 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3370 Nucleic Acid Atoms Solvent Atoms 45 Heterogen Atoms
Software Software Software Name Purpose SCALEPACK data scaling SOLVE phasing RESOLVE phasing Coot model building REFMAC refinement CNS refinement PDB_EXTRACT data extraction HKL-2000 data reduction