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HAL-A02 carrying RQFGPDFPTI
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3UTQ
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 291 0.2M potassium/sodium tartrate, 0.1M BIS TRIS propane, pH 8.5, 20% PEG 3350
Crystal Properties Matthews coefficient Solvent content 2.58 52.24
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.7 α = 90 b = 79.74 β = 115.67 c = 58.08 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2012-03-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I03 0.9763 Diamond I03
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.53 28.3 99 0.062 0.036 0.998 12.1 3.7 68029
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.53 1.57 98.7 0.623 0.367 0.818 2.1 3.7 5007
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 3UTQ 1.53 28.3 64507 3448 98.78 0.161 0.1594 0.1717 0.1905 0.1995 RANDOM 25.211
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.76 -0.12 -0.58 -0.73
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.379 r_dihedral_angle_4_deg 20.716 r_dihedral_angle_3_deg 14.306 r_dihedral_angle_1_deg 6.572 r_mcangle_it 2.163 r_angle_refined_deg 2.069 r_mcbond_it 1.415 r_mcbond_other 1.414 r_angle_other_deg 0.947 r_chiral_restr 0.124
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.379 r_dihedral_angle_4_deg 20.716 r_dihedral_angle_3_deg 14.306 r_dihedral_angle_1_deg 6.572 r_mcangle_it 2.163 r_angle_refined_deg 2.069 r_mcbond_it 1.415 r_mcbond_other 1.414 r_angle_other_deg 0.947 r_chiral_restr 0.124 r_bond_refined_d 0.021 r_gen_planes_refined 0.012 r_bond_other_d 0.002 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3183 Nucleic Acid Atoms Solvent Atoms 270 Heterogen Atoms 75
Software Software Software Name Purpose Aimless data scaling PHASER phasing REFMAC refinement PDB_EXTRACT data extraction XDS data reduction