5A22
Structure of the L protein of vesicular stomatitis virus from electron cryomicroscopy
ELECTRON MICROSCOPY
Sample |
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VESICULAR STOMATITIS VIRUS RNA- DEPENDENT RNA POLYMERASE (L) BOUND TO PHOSPHOPROTEIN P FRAGMENT |
Specimen Preparation | |
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Sample Aggregation State | PARTICLE |
Vitrification Instrument | FEI VITROBOT MARK I |
Cryogen Name | ETHANE |
Sample Vitrification Details | LIQUID ETHANE |
3D Reconstruction | |
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Reconstruction Method | SINGLE PARTICLE |
Number of Particles | 74940 |
Reported Resolution (Å) | 3.8 |
Resolution Method | |
Other Details | FREALIGN WAS USED FOR REFINEMENT AND THREE- DIMENSIONAL CLASSIFICATION. SEGMENTS A1159-A1171, A1210-A1226, A1308-1334, A1387-A1395, A1512-A1516, A1534 ... |
Refinement Type | |
Symmetry Type | POINT |
Point Symmetry | C1 |
Map-Model Fitting and Refinement | |||||
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Id | 1 | ||||
Refinement Space | RECIPROCAL | ||||
Refinement Protocol | FLEXIBLE FIT | ||||
Refinement Target | Maximum likelihood | ||||
Overall B Value | |||||
Fitting Procedure | |||||
Details | METHOD--PHENIX.REFINE |
Data Acquisition | |||||||||
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Detector Type | GATAN K2 (4k x 4k) | ||||||||
Electron Dose (electrons/Å**2) | 100 |
Imaging Experiment | 1 |
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Date of Experiment | 2014-08-01 |
Temperature (Kelvin) | 100 |
Microscope Model | FEI TECNAI F20 |
Minimum Defocus (nm) | 900 |
Maximum Defocus (nm) | 2300 |
Minimum Tilt Angle (degrees) | |
Maximum Tilt Angle (degrees) | |
Nominal CS | 2 |
Imaging Mode | OTHER |
Specimen Holder Model | |
Nominal Magnification | 29000 |
Calibrated Magnification | 40410 |
Source | FIELD EMISSION GUN |
Acceleration Voltage (kV) | 200 |
Imaging Details | GOOD MICROGRAPHS WERE SELECTED FOR DIGITISATION |
EM Software | ||
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Task | Software Package | Version |
RECONSTRUCTION | EMAN | 2 |
RECONSTRUCTION | FREALIGN | |
RECONSTRUCTION | IMAGIC |
Image Processing | ||||
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CTF Correction Type | CTF Correction Details | Number of Particles Selected | Particle Selection Details | |
INDIVIDUAL PARTICLES |