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Crystal Structure of Human Scp1 bound to trans-proline peptidomimetic CTD phospho-Ser5 peptide
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7 298 30% PEG 3350, 0.2 M magnesium acetate
Crystal Properties Matthews coefficient Solvent content 3.38 63.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 125.28 α = 90 b = 78.335 β = 112.59 c = 63.031 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD 2014-08-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 23-ID-B 1.03334 APS 23-ID-B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.36 64.86 96.9 0.05 15.3 3.7 22534
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.36 2.4 85.2 0.31 3.1 958
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.36 64.86 21427 1105 96.75 0.1862 0.1832 0.1907 0.2462 0.2534 RANDOM 47.118
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.59 1.81 0.95 -1.39
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.468 r_dihedral_angle_4_deg 20.389 r_dihedral_angle_3_deg 16.224 r_dihedral_angle_1_deg 6.998 r_mcangle_it 5.202 r_mcbond_it 3.761 r_mcbond_other 3.761 r_angle_refined_deg 1.865 r_angle_other_deg 0.862 r_chiral_restr 0.096
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.468 r_dihedral_angle_4_deg 20.389 r_dihedral_angle_3_deg 16.224 r_dihedral_angle_1_deg 6.998 r_mcangle_it 5.202 r_mcbond_it 3.761 r_mcbond_other 3.761 r_angle_refined_deg 1.865 r_angle_other_deg 0.862 r_chiral_restr 0.096 r_bond_refined_d 0.016 r_gen_planes_refined 0.008 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2980 Nucleic Acid Atoms Solvent Atoms 62 Heterogen Atoms 2
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction PHASER phasing PDB_EXTRACT data extraction HKL-2000 data scaling