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The crystal structure of hemagglutinin from A/Taiwan/1/2013 in complex with 3'SLN
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 MICROBATCH 8.5 293 0.01M nickel chloride, 0.1 M Tris-HCl pH 8.5 and 20% (w/v) PEG 2000MME
Crystal Properties Matthews coefficient Solvent content 2.93 58.05
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 186.978 α = 90 b = 100.08 β = 126.04 c = 135.239 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 325 mm CCD 2014-03-22 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 22-ID 1.0 APS 22-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 50 98.3 20.6 3.4 54578
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.7 49.94 51799 2779 98.3 0.214 0.212 0.244 0.237 RANDOM 42.09
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.19 -0.01 0.18 -0.18
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.388 r_dihedral_angle_4_deg 21.166 r_dihedral_angle_3_deg 18.595 r_long_range_B_refined 7.776 r_long_range_B_other 7.775 r_dihedral_angle_1_deg 7.352 r_scangle_other 5.666 r_mcangle_it 4.707 r_mcangle_other 4.707 r_scbond_it 3.612
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.388 r_dihedral_angle_4_deg 21.166 r_dihedral_angle_3_deg 18.595 r_long_range_B_refined 7.776 r_long_range_B_other 7.775 r_dihedral_angle_1_deg 7.352 r_scangle_other 5.666 r_mcangle_it 4.707 r_mcangle_other 4.707 r_scbond_it 3.612 r_scbond_other 3.612 r_mcbond_it 2.988 r_mcbond_other 2.986 r_angle_refined_deg 1.86 r_angle_other_deg 1.068 r_chiral_restr 0.102 r_bond_refined_d 0.014 r_gen_planes_refined 0.007 r_bond_other_d 0.005 r_gen_planes_other 0.004 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 11814 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 192
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling PHASER phasing