4UUK
Human dynamin 1 K44A superconstricted polymer stabilized with GTP strand 2
ELECTRON MICROSCOPY
Sample |
---|
GTP STABILIZED HUMAN DYNAMIN 1 K44A SUPER CONSTRICTED POLYMER |
Specimen Preparation | |
---|---|
Sample Aggregation State | FILAMENT |
Vitrification Instrument | LEICA EM GP |
Cryogen Name | ETHANE |
Sample Vitrification Details | PLUNGE FROZEN IN LIQUID ETHANE |
3D Reconstruction | |
---|---|
Reconstruction Method | HELICAL |
Number of Particles | 7525 |
Reported Resolution (Å) | 12.5 |
Resolution Method | |
Other Details | THIS MODEL INCORPORATES COORDINATES FROM 3ZYC, , 3SNH, AND 1DYN, WHICH WERE DOCKED INTO A HELICAL CRYO-EM DENSITY. SUBMISSION BASED ON EXPERIMENTAL DA ... |
Refinement Type | |
Symmetry Type | HELICAL |
Map-Model Fitting and Refinement | |||||
---|---|---|---|---|---|
Id | 1 (3ZYC, 3SNH, 1DYN) | ||||
Refinement Space | REAL | ||||
Refinement Protocol | FLEXIBLE FIT | ||||
Refinement Target | |||||
Overall B Value | |||||
Fitting Procedure | |||||
Details | METHOD--YUP ALGORITHM REFINEMENT PROTOCOL--X-RAY |
Data Acquisition | |||||||||
---|---|---|---|---|---|---|---|---|---|
Detector Type | KODAK SO-163 FILM | ||||||||
Electron Dose (electrons/Å**2) | 10 |
Imaging Experiment | 1 |
---|---|
Date of Experiment | 2012-12-17 |
Temperature (Kelvin) | |
Microscope Model | FEI/PHILIPS CM300FEG/HE |
Minimum Defocus (nm) | 500 |
Maximum Defocus (nm) | 2500 |
Minimum Tilt Angle (degrees) | |
Maximum Tilt Angle (degrees) | |
Nominal CS | |
Imaging Mode | BRIGHT FIELD |
Specimen Holder Model | |
Nominal Magnification | 49000 |
Calibrated Magnification | |
Source | FIELD EMISSION GUN |
Acceleration Voltage (kV) | 200 |
Imaging Details |
EM Software | ||
---|---|---|
Task | Software Package | Version |
MODEL FITTING | Yup.scx | |
RECONSTRUCTION | SPIDER |
Image Processing | ||||
---|---|---|---|---|
CTF Correction Type | CTF Correction Details | Number of Particles Selected | Particle Selection Details | |
INDIVIDUAL IMAGES |