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Crystal structure of Acinetobacter baumannii CarO2
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 292 63% MPD, 0.1 M Tris, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 292K
Crystal Properties Matthews coefficient Solvent content 3.53 65.19
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 139.602 α = 90 b = 139.602 β = 90 c = 138.759 γ = 120
Symmetry Space Group P 65 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2014-02-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I02 0.97949 Diamond I02
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 120.899 99.9 22490
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.7 2.83 100
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.7 60 21380 1071 99.84 0.19203 0.19022 0.1962 0.22823 0.2211 RANDOM 64.427
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.9 0.45 0.9 -2.92
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.945 r_dihedral_angle_4_deg 21.802 r_dihedral_angle_3_deg 16.841 r_long_range_B_refined 9.289 r_long_range_B_other 9.288 r_scangle_other 7.82 r_dihedral_angle_1_deg 6.86 r_scbond_it 5.435 r_scbond_other 5.435 r_mcangle_it 5.243
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.945 r_dihedral_angle_4_deg 21.802 r_dihedral_angle_3_deg 16.841 r_long_range_B_refined 9.289 r_long_range_B_other 9.288 r_scangle_other 7.82 r_dihedral_angle_1_deg 6.86 r_scbond_it 5.435 r_scbond_other 5.435 r_mcangle_it 5.243 r_mcangle_other 5.243 r_mcbond_it 3.814 r_mcbond_other 3.808 r_angle_refined_deg 1.796 r_angle_other_deg 1.194 r_chiral_restr 0.104 r_bond_refined_d 0.018 r_gen_planes_refined 0.01 r_bond_other_d 0.005 r_gen_planes_other 0.005 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3240 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose GDA data collection MOLREP phasing REFMAC refinement XDS data reduction XDS data scaling