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Crystal structure of computational designed leucine rich repeats DLRR_E in space group of P212121
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.2 298 20% PEG 1000 v/v, 0.1 M Na/K phosphate, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 1.92 35.95
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 32.137 α = 90 b = 77.707 β = 90 c = 101.889 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2014-04-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 5.0.1 0.997 ALS 5.0.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.93 42.6 99.4 0.063 17.8 6.4 20114 19993 1 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.93 2 96 0.171 5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.93 42.6 19993 18923 1011 99.83 0.16017 0.15688 0.1672 0.22216 0.232 RANDOM 31.949
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.2 -2.43 0.23
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 48.308 r_dihedral_angle_4_deg 19.228 r_dihedral_angle_3_deg 13.39 r_long_range_B_refined 6.606 r_long_range_B_other 6.597 r_dihedral_angle_1_deg 6.404 r_scangle_other 3.483 r_scbond_it 2.244 r_scbond_other 2.233 r_mcangle_it 1.818
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 48.308 r_dihedral_angle_4_deg 19.228 r_dihedral_angle_3_deg 13.39 r_long_range_B_refined 6.606 r_long_range_B_other 6.597 r_dihedral_angle_1_deg 6.404 r_scangle_other 3.483 r_scbond_it 2.244 r_scbond_other 2.233 r_mcangle_it 1.818 r_mcangle_other 1.808 r_angle_refined_deg 1.802 r_mcbond_it 1.195 r_mcbond_other 1.194 r_angle_other_deg 0.882 r_chiral_restr 0.103 r_bond_refined_d 0.018 r_gen_planes_refined 0.008 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2337 Nucleic Acid Atoms Solvent Atoms 112 Heterogen Atoms 8
Software Software Software Name Purpose ADSC data collection PHASER phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling