☰ Navigation Tabs
Crystal structure of DnaT84-153-dT10 ssDNA complex form 1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP VAPOR DIFFUSION, HANGING DROP
Crystal Properties Matthews coefficient Solvent content 2.48 50.48
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 47.144 α = 88.34 b = 47.416 β = 86.25 c = 54.135 γ = 71.24
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRF BEAMLINE BL17U 0.97930 SSRF BL17U
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.96 27.54 30764
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.96 27.54 29206 1559 96.72 0.19056 0.1886 0.194 0.22846 0.2261 RANDOM 42.747
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.42 -1.65 1.05 1.97 -1.62 -2.46
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.14 r_dihedral_angle_4_deg 14.289 r_dihedral_angle_3_deg 12.088 r_long_range_B_refined 7.438 r_long_range_B_other 7.236 r_dihedral_angle_1_deg 4.856 r_scangle_other 4.805 r_mcangle_it 3.69 r_mcangle_other 3.69 r_scbond_it 3.059
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.14 r_dihedral_angle_4_deg 14.289 r_dihedral_angle_3_deg 12.088 r_long_range_B_refined 7.438 r_long_range_B_other 7.236 r_dihedral_angle_1_deg 4.856 r_scangle_other 4.805 r_mcangle_it 3.69 r_mcangle_other 3.69 r_scbond_it 3.059 r_scbond_other 3.056 r_mcbond_it 2.488 r_mcbond_other 2.484 r_angle_other_deg 1.256 r_angle_refined_deg 1.209 r_chiral_restr 0.075 r_bond_refined_d 0.009 r_gen_planes_other 0.008 r_bond_other_d 0.007 r_gen_planes_refined 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2915 Nucleic Acid Atoms 200 Solvent Atoms 257 Heterogen Atoms
Software Software Software Name Purpose MAR345dtb data collection MOLREP phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling