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Inhibitors of 4-Phosphopanthetheine Adenylyltransferase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.5 298 14 to 19% polyethylene glycol 3350 (PEG 3350), 200 mM ammonium sulfate, 0.1M Propionic acid Cacodylate Bis-tris propane buffer, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.79 55.87
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 76.157 α = 90 b = 127.283 β = 90 c = 126.95 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-BM APS 19-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.72 24.92 89 55684 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.72 1.769
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.72 24.9 2190 52871 2812 85.44 0.22966 0.22716 0.2345 0.2774 0.2839 RANDOM 34.024
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.01 0.01 0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.974 r_dihedral_angle_4_deg 23.062 r_dihedral_angle_3_deg 16.502 r_dihedral_angle_1_deg 6.942 r_mcangle_it 3.649 r_scbond_it 3.454 r_mcbond_other 2.81 r_mcbond_it 2.809 r_angle_refined_deg 2.442 r_angle_other_deg 1.158
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.974 r_dihedral_angle_4_deg 23.062 r_dihedral_angle_3_deg 16.502 r_dihedral_angle_1_deg 6.942 r_mcangle_it 3.649 r_scbond_it 3.454 r_mcbond_other 2.81 r_mcbond_it 2.809 r_angle_refined_deg 2.442 r_angle_other_deg 1.158 r_symmetry_vdw_other 0.261 r_chiral_restr 0.233 r_symmetry_vdw_refined 0.198 r_xyhbond_nbd_refined 0.16 r_symmetry_hbond_refined 0.148 r_xyhbond_nbd_other 0.144 r_bond_refined_d 0.018 r_gen_planes_refined 0.009 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3739 Nucleic Acid Atoms Solvent Atoms 117 Heterogen Atoms 195
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction