☰ Navigation Tabs
Structure of a class 2 docking domain complex from modules CurK and CurL of the curacin A polyketide synthase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.5 277 3.4M Ammonium sulfate and 0.1M Bis-Tris propane pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.29 46.26
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 90.889 α = 90 b = 59.532 β = 124.87 c = 52.867 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MAR scanner 300 mm plate 2012-03-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 23-ID-D 1.033 APS 23-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 50 96.9 0.045 3.7 35689 35689
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.5 1.55 98.7 0.65 2.5 3.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.5 26.45 36890 33881 1768 96.58 0.179 0.17767 0.1756 0.20276 0.2014 RANDOM 23.172
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.72 0.18 0.53 0.03
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.577 r_dihedral_angle_3_deg 12.684 r_long_range_B_refined 8.703 r_long_range_B_other 8.425 r_dihedral_angle_4_deg 8.206 r_scangle_other 3.859 r_dihedral_angle_1_deg 3.758 r_mcangle_it 2.795 r_scbond_other 2.515 r_scbond_it 2.427
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.577 r_dihedral_angle_3_deg 12.684 r_long_range_B_refined 8.703 r_long_range_B_other 8.425 r_dihedral_angle_4_deg 8.206 r_scangle_other 3.859 r_dihedral_angle_1_deg 3.758 r_mcangle_it 2.795 r_scbond_other 2.515 r_scbond_it 2.427 r_mcangle_other 2.407 r_mcbond_it 1.64 r_mcbond_other 1.633 r_angle_refined_deg 1.194 r_angle_other_deg 0.703 r_chiral_restr 0.068 r_bond_refined_d 0.009 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1193 Nucleic Acid Atoms Solvent Atoms 160 Heterogen Atoms
Software Software Software Name Purpose Blu-Ice data collection PHASER phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling