X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP829310% PEG4000, 0.2M ammonium sulfate, 7% Sucrose and 0.1 M TRIS pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
3.2161.67

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 104.575α = 90
b = 120.971β = 90
c = 181.009γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2012-10-15MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 21-ID-D0.979APS21-ID-D

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.539.5197.174020

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSIRASTHROUGHOUT2.539.517402074020389497.080.234250.231970.27633RANDOM76.177
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.070.030.04
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg41.784
r_dihedral_angle_3_deg21.212
r_dihedral_angle_4_deg18.811
r_dihedral_angle_1_deg9.882
r_mcangle_it8.756
r_mcbond_it5.665
r_mcbond_other5.661
r_scbond_it5.362
r_angle_refined_deg1.844
r_angle_other_deg1.151
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg41.784
r_dihedral_angle_3_deg21.212
r_dihedral_angle_4_deg18.811
r_dihedral_angle_1_deg9.882
r_mcangle_it8.756
r_mcbond_it5.665
r_mcbond_other5.661
r_scbond_it5.362
r_angle_refined_deg1.844
r_angle_other_deg1.151
r_chiral_restr0.102
r_bond_refined_d0.013
r_gen_planes_refined0.008
r_bond_other_d0.004
r_gen_planes_other0.004
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms11012
Nucleic Acid Atoms
Solvent Atoms205
Heterogen Atoms29

Software

Software
Software NamePurpose
HKL-3000data collection
X-PLORmodel building
REFMACrefinement
HKL-3000data reduction
SCALAdata scaling
X-PLORphasing