☰ Navigation Tabs
HCV NS5B GT1B N316Y with CMPD 4
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5 298 0.1M citrate pH5.0, 17% PEG4000, 10% glycerol, vapor diffusion, hanging drop, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.24 45.06
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 86.04 α = 90 b = 106.45 β = 90 c = 126.49 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RIGAKU SATURN 944 multi-layer mirror 2010-03-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU FR-E+ SUPERBRIGHT 1.54
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.06 40.72 97.1 0.104 0.104 7.4 6.5 71514
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.25 2.29 89.7 0.469 6.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.06 40.72 67893 67893 3621 100 0.21319 0.21118 0.218 0.25039 0.2583 RANDOM 9.693
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.73 1.98 -1.24
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.429 r_dihedral_angle_4_deg 12.295 r_dihedral_angle_3_deg 10.781 r_dihedral_angle_1_deg 5.076 r_scangle_it 1.555 r_angle_refined_deg 0.961 r_scbond_it 0.919 r_angle_other_deg 0.917 r_mcangle_it 0.598 r_mcbond_it 0.308
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.429 r_dihedral_angle_4_deg 12.295 r_dihedral_angle_3_deg 10.781 r_dihedral_angle_1_deg 5.076 r_scangle_it 1.555 r_angle_refined_deg 0.961 r_scbond_it 0.919 r_angle_other_deg 0.917 r_mcangle_it 0.598 r_mcbond_it 0.308 r_chiral_restr 0.052 r_mcbond_other 0.051 r_bond_refined_d 0.006 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8325 Nucleic Acid Atoms Solvent Atoms 825 Heterogen Atoms 80
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling MOLREP phasing REFMAC refinement PDB_EXTRACT data extraction JDirector data collection