☰ Navigation Tabs
Crystal structure of the Mycobacterum abscessus EsxEF (Mab_3112-Mab_3113) complex
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.6 291 RESERVOIR: 0.1M tri-sodium citrate, pH5.6, 0.2M potassium
sodium tartrate, 2M ammonium sulfate. PROTEIN CONCENTRATION: 11 MG/ML. PROTEIN BUFFER: 20 mM Tris, pH 8.0, 150mM NaCl, 10% Glycerol, 2 mM B-ME. CRYO: reservoir solution plus 25% glycerol., VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystal Properties Matthews coefficient Solvent content 2.02 39.02
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 47.6 α = 114.57 b = 74.06 β = 103.28 c = 84.42 γ = 95.52
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL PSI PILATUS 6M 2011-07-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 24-ID-C 0.9791 APS 24-ID-C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.956 19.995 93 0.057 13.69 1.959 72126 67097
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT 1.956 19.995 1.99 72126 67097 6709 93.37 0.1647 0.1593 0.1614 0.2131 0.215
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 15.195 f_angle_d 1.156 f_chiral_restr 0.074 f_bond_d 0.012 f_plane_restr 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7044 Nucleic Acid Atoms Solvent Atoms 337 Heterogen Atoms 15
Software Software Software Name Purpose PHASER phasing PHENIX refinement XDS data reduction XDS data scaling