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Structure of the Schizosaccharomyces pombe Mediator head module
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6 293 50 mM MES, 1 M ammonium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 293K, pH 6.0
Crystal Properties Matthews coefficient Solvent content 4.91 74.96
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 145.6 α = 90 b = 145.6 β = 90 c = 241.62 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL PSI PILATUS 6M mirrors 2012-04-02 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA 0.99977 SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.4 126.093 100 0.125 0.125 15.16 10 41454 41454 82.19
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.4 3.49 99.9 0.04124 0.04124 0.64 9.2 3007
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIRAS THROUGHOUT 3.4 126.093 41453 41453 2100 99.99 0.2332 0.2332 0.2319 0.2557 0.2579 0.2927 RANDOM 165.62
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 7.3829 7.3829 -14.7659
RMS Deviations Key Refinement Restraint Deviation t_other_torsion 3.5 t_omega_torsion 2.49 t_angle_deg 1.13 t_bond_d 0.009
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 9254 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose RemDAq data collection SHARP phasing BUSTER refinement XDS data reduction XSCALE data scaling