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Synthesis of novel MT3 receptor ligands via unusual Knoevenagel condensation
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP VAPOR DIFFUSION, HANGING DROP
Crystal Properties Matthews coefficient Solvent content 2.43 49.39
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 56.609 α = 90 b = 83.369 β = 90 c = 106.494 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray IMAGE PLATE RIGAKU RAXIS IV++ M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU 1.54
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.291 26.802 23308 22999
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.291 26.802 23127 22999 1177 98.59 0.1701 0.1668 0.1715 0.2322 0.236 RANDOM 26.535
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.4 0.04 -1.43
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.551 r_dihedral_angle_4_deg 19.074 r_dihedral_angle_3_deg 15.532 r_dihedral_angle_1_deg 6.886 r_scangle_it 3.751 r_scbond_it 2.545 r_angle_refined_deg 1.974 r_mcangle_it 1.443 r_mcbond_it 0.829 r_chiral_restr 0.128
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.551 r_dihedral_angle_4_deg 19.074 r_dihedral_angle_3_deg 15.532 r_dihedral_angle_1_deg 6.886 r_scangle_it 3.751 r_scbond_it 2.545 r_angle_refined_deg 1.974 r_mcangle_it 1.443 r_mcbond_it 0.829 r_chiral_restr 0.128 r_bond_refined_d 0.02 r_gen_planes_refined 0.009
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3648 Nucleic Acid Atoms Solvent Atoms 212 Heterogen Atoms 150
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data collection