X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION6.1303ammonium sulfate, MES, pH 6.1, VAPOR DIFFUSION, temperature 303K
Crystal Properties
Matthews coefficientSolvent content
2.4950.56

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 54.114α = 90
b = 63.091β = 100.73
c = 107.558γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMAR CCD 165 mm2004-02-01MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSPRING-8 BEAMLINE BL44B21SPring-8BL44B2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.855099.66326660735
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.851.9299.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.85305811557650306699.610.170090.170090.168380.20274RANDOM26.207
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.30.380.6-0.17
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.533
r_dihedral_angle_4_deg14.776
r_dihedral_angle_3_deg14.061
r_dihedral_angle_1_deg4.775
r_scangle_it3.823
r_scbond_it2.486
r_angle_refined_deg1.796
r_mcangle_it1.346
r_mcbond_it0.902
r_nbtor_refined0.301
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.533
r_dihedral_angle_4_deg14.776
r_dihedral_angle_3_deg14.061
r_dihedral_angle_1_deg4.775
r_scangle_it3.823
r_scbond_it2.486
r_angle_refined_deg1.796
r_mcangle_it1.346
r_mcbond_it0.902
r_nbtor_refined0.301
r_chiral_restr0.22
r_nbd_refined0.207
r_symmetry_vdw_refined0.198
r_symmetry_hbond_refined0.139
r_xyhbond_nbd_refined0.133
r_bond_refined_d0.014
r_gen_planes_refined0.006
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms5008
Nucleic Acid Atoms
Solvent Atoms425
Heterogen Atoms171

Software

Software
Software NamePurpose
HKL-2000data collection
CNSrefinement
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling
CNSphasing