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Structure of the effector - immunity system Tse1 / Tsi1 from Pseudomonas aeruginosa
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 293 100 mM sodium cacodylate pH 6.5, 250 mM ammonium sulfate, 18% (w/v) PEG 8000, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 3.62 66.05
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 97.56 α = 90 b = 97.56 β = 90 c = 423.74 γ = 90
Symmetry Space Group P 41 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL PSI PILATUS 6M 2012-02-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA 0.9794 SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.2 50 99.9 0.138 17 14.4 35069 35044
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.2 3.4 99.9 0.45 6.48 14.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 3.2 49.33 35044 33289 1753 100 0.226 0.22397 0.26309 0.2499 RANDOM 72.577
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.49 -0.49 0.98
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.904 r_dihedral_angle_4_deg 18.271 r_dihedral_angle_3_deg 17.124 r_dihedral_angle_1_deg 5.158 r_scangle_it 0.988 r_angle_refined_deg 0.97 r_scbond_it 0.636 r_mcangle_it 0.332 r_nbtor_refined 0.296 r_mcbond_it 0.243
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.904 r_dihedral_angle_4_deg 18.271 r_dihedral_angle_3_deg 17.124 r_dihedral_angle_1_deg 5.158 r_scangle_it 0.988 r_angle_refined_deg 0.97 r_scbond_it 0.636 r_mcangle_it 0.332 r_nbtor_refined 0.296 r_mcbond_it 0.243 r_symmetry_hbond_refined 0.208 r_nbd_refined 0.182 r_symmetry_vdw_refined 0.16 r_xyhbond_nbd_refined 0.13 r_chiral_restr 0.064 r_bond_refined_d 0.006 r_gen_planes_refined 0.002 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8893 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose SHELXD phasing SHELXE model building REFMAC refinement XDS data reduction XDS data scaling