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Crystal structure of the C-terminal domain of ClpB
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 hanging drop 8 294 ammonium acetate, PEG 3350, pH 8.0, hanging drop, temperature 294K
Crystal Properties Matthews coefficient Solvent content 2.23 44.96
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 68.146 α = 90 b = 116.814 β = 119.52 c = 68.945 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.9786 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.4 60 12853
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 3.4 41.85 12853 647 99.01 0.2345 0.2331 0.2356 0.2607 0.2561 RANDOM 107.8985
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -4.84 -2.28 4.19 -1.6
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.119 r_dihedral_angle_3_deg 20.163 r_dihedral_angle_4_deg 17.979 r_dihedral_angle_1_deg 5.44 r_scangle_it 3.619 r_scbond_it 2.025 r_mcangle_it 1.225 r_angle_refined_deg 1.191 r_mcbond_it 0.559 r_chiral_restr 0.076
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.119 r_dihedral_angle_3_deg 20.163 r_dihedral_angle_4_deg 17.979 r_dihedral_angle_1_deg 5.44 r_scangle_it 3.619 r_scbond_it 2.025 r_mcangle_it 1.225 r_angle_refined_deg 1.191 r_mcbond_it 0.559 r_chiral_restr 0.076 r_bond_refined_d 0.009 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7446 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 81
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction