☰ Navigation Tabs
Crystal Structure of mutant S554D for ArfGAP and ANK repeat domain of ACAP1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.1 289 0.2M ammonium sulfate, 12-14% PEG 3350, 0.1M Sodium Citrate, pH 5.1, VAPOR DIFFUSION, HANGING DROP, temperature 289K
Crystal Properties Matthews coefficient Solvent content 2.31 46.74
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 107.561 α = 90 b = 163.46 β = 90 c = 41.184 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 270 2008-11-19 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PHOTON FACTORY BEAMLINE BL-17A 1.2 Photon Factory BL-17A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 50 97.4 33326 32470 -0.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.38 91.9 0.393 4.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.3 50 31604 30786 1635 97.45 0.21807 0.21714 0.2152 0.23496 0.2322 RANDOM 53.388
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.63 -2.62 3.25
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 26.78 r_dihedral_angle_4_deg 17.179 r_dihedral_angle_3_deg 13.99 r_dihedral_angle_1_deg 4.967 r_scangle_it 1.514 r_angle_refined_deg 1.093 r_scbond_it 0.96 r_mcangle_it 0.488 r_nbtor_refined 0.291 r_mcbond_it 0.288
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 26.78 r_dihedral_angle_4_deg 17.179 r_dihedral_angle_3_deg 13.99 r_dihedral_angle_1_deg 4.967 r_scangle_it 1.514 r_angle_refined_deg 1.093 r_scbond_it 0.96 r_mcangle_it 0.488 r_nbtor_refined 0.291 r_mcbond_it 0.288 r_symmetry_vdw_refined 0.218 r_nbd_refined 0.189 r_symmetry_hbond_refined 0.133 r_xyhbond_nbd_refined 0.13 r_chiral_restr 0.071 r_bond_refined_d 0.006 r_gen_planes_refined 0.005 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3706 Nucleic Acid Atoms Solvent Atoms 118 Heterogen Atoms 12
Software Software Software Name Purpose ADSC data collection PHASES phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling