☰ Navigation Tabs
Design and synthesis of potent hydroxyethylamine (hea) bace-1 inhibitors
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 5 299 16%PEG1000, 0.1 M NAacetate, 5 % Glycerol, pH 5.0, VAPOR DIFFUSION, temperature 299K
Crystal Properties Matthews coefficient Solvent content 2.28 46.03
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 48.072 α = 90 b = 76.429 β = 90 c = 104.187 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 1 2010-01-28 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 1.072 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 61.6 99.5 36365 36204 2 2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.8 61.6 34399 36204 1805 99.56 0.1808 0.1783 0.1766 0.2274 0.2257 RANDOM 22.2762
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.02 -0.49 -1.53
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.311 r_dihedral_angle_4_deg 17.209 r_dihedral_angle_3_deg 14.963 r_dihedral_angle_1_deg 7.48 r_scangle_it 5.7 r_scbond_it 3.589 r_mcangle_it 2.435 r_angle_refined_deg 2.188 r_mcbond_it 1.446 r_chiral_restr 0.181
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.311 r_dihedral_angle_4_deg 17.209 r_dihedral_angle_3_deg 14.963 r_dihedral_angle_1_deg 7.48 r_scangle_it 5.7 r_scbond_it 3.589 r_mcangle_it 2.435 r_angle_refined_deg 2.188 r_mcbond_it 1.446 r_chiral_restr 0.181 r_bond_refined_d 0.026 r_gen_planes_refined 0.012
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2959 Nucleic Acid Atoms Solvent Atoms 328 Heterogen Atoms 32
Software Software Software Name Purpose MOSFLM data reduction REFMAC refinement PDB_EXTRACT data extraction DNA data collection PHASER phasing CCP4 phasing