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Crystal structure of Campylobacter jejuni ferric uptake regulator
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 EVAPORATION 6 298 200mM MnSO4, 10-20% PEG3350, pH 6.0, EVAPORATION, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.64 53.48
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 35.954 α = 90 b = 85.284 β = 90 c = 128.435 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 200 CCD MARMOSAIC 300 mm CCD 2010-09-09 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-D 1.07820 APS 21-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 30 100 23938 23938 3 3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.1 27.76 22655 1222 99.63 0.23731 0.23573 0.26579 0.2732 RANDOM 42.536
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.09 0.02 0.06
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.89 r_dihedral_angle_4_deg 22.69 r_dihedral_angle_3_deg 19.989 r_dihedral_angle_1_deg 6.527 r_scangle_it 5.338 r_scbond_it 3.337 r_mcangle_it 2.259 r_angle_refined_deg 1.897 r_mcbond_it 1.292 r_chiral_restr 0.16
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.89 r_dihedral_angle_4_deg 22.69 r_dihedral_angle_3_deg 19.989 r_dihedral_angle_1_deg 6.527 r_scangle_it 5.338 r_scbond_it 3.337 r_mcangle_it 2.259 r_angle_refined_deg 1.897 r_mcbond_it 1.292 r_chiral_restr 0.16 r_bond_refined_d 0.023 r_gen_planes_refined 0.009 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2323 Nucleic Acid Atoms Solvent Atoms 77 Heterogen Atoms 5
Software Software Software Name Purpose HKL-2000 data collection PHASER phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling