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Crystal Structure of statistically disordered 19mer duplex p(CGG)3C(CUG)3
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.2 291 1.9 mM ammonium sulfate, 5% isopropanol, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystal Properties Matthews coefficient Solvent content 2.12 41.86
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 39.779 α = 90 b = 39.779 β = 90 c = 34.9 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2010-10-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 0.9724 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.47 30 99.4 0.049 24.1 3.4 3488 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.47 1.5 97.1 0.169 2.1 169
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.47 15 3481 152 99.4 0.2048 0.2043 0.2083 0.2194 0.2241 RANDOM 31.9728
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.01 0.01 0.01 -0.02
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 1.903 r_angle_refined_deg 1.859 r_angle_other_deg 1.673 r_scbond_it 1.329 r_symmetry_vdw_other 0.528 r_nbtor_refined 0.239 r_nbd_other 0.192 r_symmetry_vdw_refined 0.115 r_chiral_restr 0.071 r_nbd_refined 0.06
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 1.903 r_angle_refined_deg 1.859 r_angle_other_deg 1.673 r_scbond_it 1.329 r_symmetry_vdw_other 0.528 r_nbtor_refined 0.239 r_nbd_other 0.192 r_symmetry_vdw_refined 0.115 r_chiral_restr 0.071 r_nbd_refined 0.06 r_nbtor_other 0.059 r_xyhbond_nbd_refined 0.031 r_bond_refined_d 0.02 r_gen_planes_other 0.012 r_gen_planes_refined 0.006 r_symmetry_hbond_refined 0.005 r_bond_other_d
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms Nucleic Acid Atoms 344 Solvent Atoms 18 Heterogen Atoms
Software Software Software Name Purpose SCALEPACK data scaling AMoRE phasing REFMAC refinement PDB_EXTRACT data extraction ADSC data collection DENZO data reduction