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Haemagglutinin of H10N8 Influenza Virus Isolated from Humans in Complex with Human Receptor Analogue 6'SLN
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 10% PEG 6000, 5% MPD AND 0.1 M HEPES PH 7.5
Crystal Properties Matthews coefficient Solvent content 4.02 69
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 90.601 α = 90 b = 183.169 β = 90 c = 192.145 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 RIGAKU R-AXIS IV M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 HF
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.5 40 92.8 0.16 6.21 3.8 390165 -1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.5 2.61 90 0.52 2.06 3.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.5 132.58 98018 5013 92.7 0.20978 0.20852 0.2112 0.23474 0.2374 RANDOM 30.987
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.66 1.21 -0.55
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.954 r_dihedral_angle_4_deg 15.429 r_dihedral_angle_3_deg 15.037 r_dihedral_angle_1_deg 5.421 r_mcangle_it 1.408 r_scbond_it 1.285 r_angle_refined_deg 1.102 r_angle_other_deg 0.827 r_mcbond_it 0.784 r_mcbond_other 0.784
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.954 r_dihedral_angle_4_deg 15.429 r_dihedral_angle_3_deg 15.037 r_dihedral_angle_1_deg 5.421 r_mcangle_it 1.408 r_scbond_it 1.285 r_angle_refined_deg 1.102 r_angle_other_deg 0.827 r_mcbond_it 0.784 r_mcbond_other 0.784 r_chiral_restr 0.06 r_bond_refined_d 0.006 r_gen_planes_refined 0.004 r_bond_other_d 0.003 r_gen_planes_other 0.002 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 11564 Nucleic Acid Atoms Solvent Atoms 703 Heterogen Atoms 309
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling PHASER phasing