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Crystal structure of the neuronal isoform of PTB
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 0.1 M TRIS (PH 8.0), 2 MM ZNCL2, 20% PEG 6000
Crystal Properties Matthews coefficient Solvent content 2.28 46
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 61 α = 89.99 b = 65.81 β = 90 c = 99.58 γ = 89.99
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD MIRRORS 2010-02-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I02 Diamond I02
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.69 44.74 89 0.1 5 1.9 153732 6
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.69 1.72 85.6 0.71 1.1 1.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT NONE 1.69 40.81 145936 7790 88.93 0.17188 0.17003 0.1763 0.20762 0.1782 RANDOM 17.692
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 13.84 -6.47 0.53 -4.33 1.1 -9.51
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.594 r_dihedral_angle_4_deg 22.371 r_dihedral_angle_3_deg 14.782 r_dihedral_angle_1_deg 7.592 r_mcangle_it 4.189 r_scbond_it 3.781 r_mcbond_it 3.244 r_mcbond_other 3.244 r_angle_refined_deg 0.937 r_angle_other_deg 0.583
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.594 r_dihedral_angle_4_deg 22.371 r_dihedral_angle_3_deg 14.782 r_dihedral_angle_1_deg 7.592 r_mcangle_it 4.189 r_scbond_it 3.781 r_mcbond_it 3.244 r_mcbond_other 3.244 r_angle_refined_deg 0.937 r_angle_other_deg 0.583 r_chiral_restr 0.063 r_gen_planes_refined 0.01 r_bond_refined_d 0.006 r_bond_other_d r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 11595 Nucleic Acid Atoms Solvent Atoms 782 Heterogen Atoms 20
Software Software Software Name Purpose MOSFLM data reduction Aimless data scaling autoSHARP phasing PHASER phasing REFMAC refinement