4CFZ

SAVINASE CRYSTAL STRUCTURES FOR COMBINED SINGLE CRYSTAL DIFFRACTION AND POWDER DIFFRACTION ANALYSIS


X-RAY DIFFRACTION

Starting Model(s)

Initial Refinement Model(s)
TypeSourceAccession CodeDetails
experimental modelPDB 1SVNPDB ENTRY 1SVN

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1CRYSTALS FROM INDUSTRIAL PRODUCTION SUSPENSION
Crystal Properties
Matthews coefficientSolvent content
1.633.8

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 52.72α = 90
b = 57.13β = 90
c = 65.86γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 3152012-09-16MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMOND BEAMLINE I04DiamondI04

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.5723.9498.40.084166.7280092
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.571.6186.10.522.34.3

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1SVN1.5723.9426551140598.310.140620.138550.17967RANDOM10.861
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.48-0.360.84
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg40.133
r_dihedral_angle_4_deg19.589
r_dihedral_angle_3_deg11.713
r_dihedral_angle_1_deg6.029
r_long_range_B_refined5.097
r_long_range_B_other4.647
r_scangle_other2.208
r_scbond_it2.046
r_angle_refined_deg1.924
r_scbond_other1.525
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg40.133
r_dihedral_angle_4_deg19.589
r_dihedral_angle_3_deg11.713
r_dihedral_angle_1_deg6.029
r_long_range_B_refined5.097
r_long_range_B_other4.647
r_scangle_other2.208
r_scbond_it2.046
r_angle_refined_deg1.924
r_scbond_other1.525
r_mcangle_other1.375
r_mcangle_it1.372
r_angle_other_deg0.935
r_mcbond_it0.925
r_mcbond_other0.911
r_chiral_restr0.122
r_bond_refined_d0.019
r_gen_planes_refined0.01
r_bond_other_d0.002
r_gen_planes_other0.002
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1871
Nucleic Acid Atoms
Solvent Atoms269
Heterogen Atoms32

Software

Software
Software NamePurpose
REFMACrefinement
MOLREPphasing