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Location of the dsRNA-dependent polymerase, VP1, in rotavirus particles
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2R7O
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument HOMEMADE PLUNGER Cryogen Name ETHANE Sample Vitrification Details LIQUID ETHANE
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 7000 Reported Resolution (Å) 6 Resolution Method Other Details SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-2100.(DEPOSITION ID: 10810). Refinement Type Symmetry Type POINT Point Symmetry I
Map-Model Fitting and Refinement Id 1 (2R7O) Refinement Space RECIPROCAL Refinement Protocol OTHER Refinement Target Cross-correlation coefficient Overall B Value Fitting Procedure Details METHOD--URO REFINEMENT PROTOCOL--X-RAY
Data Acquisition Detector Type KODAK SO-163 FILM Electron Dose (electrons/Å**2) 15
Imaging Experiment 1 Date of Experiment 2007-06-01 Temperature (Kelvin) 90 Microscope Model FEI TECNAI F30 Minimum Defocus (nm) 1100 Maximum Defocus (nm) 3500 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) 0.001 Nominal CS 2 Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification 59000 Calibrated Magnification 56540 Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version MODEL FITTING URO MODEL FITTING VEDA RECONSTRUCTION FPM RECONSTRUCTION RICO
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details INDIVIDUAL PARTICLE PHASE FLIPPING