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A complex structure of BtGH84
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2CHO PDB ENTRY 2CHO
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 0.3 M AMMONIUM ACETATE, 0.1 M MES PH 6.0, 15% PEG 3350(W/V), 10% GLYCEROL
Crystal Properties Matthews coefficient Solvent content 2.72 54.88
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 51.33 α = 104.27 b = 93.77 β = 94.01 c = 99.16 γ = 102.97
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2009-09-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-1 ESRF ID14-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 34.38 96.8 0.1 7.9 2.1 113272 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.11 95.8 0.41 2 2.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2CHO 2 33.77 107583 5687 96.84 0.19594 0.19339 0.1986 0.24406 0.2495 RANDOM 25.549
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.08 -0.26 -0.57 0.41 -1.71 -0.36
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.769 r_dihedral_angle_4_deg 17.865 r_dihedral_angle_3_deg 15.45 r_dihedral_angle_1_deg 6.439 r_angle_refined_deg 1.633 r_chiral_restr 0.109 r_bond_refined_d 0.019 r_gen_planes_refined 0.009 r_bond_other_d r_angle_other_deg
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.769 r_dihedral_angle_4_deg 17.865 r_dihedral_angle_3_deg 15.45 r_dihedral_angle_1_deg 6.439 r_angle_refined_deg 1.633 r_chiral_restr 0.109 r_bond_refined_d 0.019 r_gen_planes_refined 0.009 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_it r_mcbond_other r_mcangle_it r_mcangle_other r_scbond_it r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 10367 Nucleic Acid Atoms Solvent Atoms 859 Heterogen Atoms 28
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling