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Structure of the enoyl-ACP reductase FabV from Yersinia pestis with the cofactor NADH (SIRAS)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 1.25M SODIUM MALONATE, 100MM IMIDAZOLE PH 8.25.
Crystal Properties Matthews coefficient Solvent content 4.08 69.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 104.16 α = 90 b = 104.16 β = 90 c = 219.14 γ = 120
Symmetry Space Group P 65 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH M SINGLE WAVELENGTH 2 1 x-ray 100 CCD ADSC CCD M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON BESSY BEAMLINE 14.1 BESSY 14.1 2 SYNCHROTRON ESRF BEAMLINE ID29 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 39.4 99.8 0.06 15.8 7.2 48035 2.5 44.83
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION SIRAS NONE 2.1 34.821 40073 2018 95.84 0.2009 0.1994 0.1998 0.2279 0.2318
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.2821 -0.2821 0.5641
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 16.326 f_angle_d 1.136 f_chiral_restr 0.073 f_bond_d 0.007 f_plane_restr 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3170 Nucleic Acid Atoms Solvent Atoms 160 Heterogen Atoms 45
Software Software Software Name Purpose PHENIX refinement iMOSFLM data reduction SCALA data scaling autoSHARP phasing