3ZGK
NMR solution structure of the RXLR effector AVR3a11 from Phytophthora Capsici
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 1H-15N HSQC | 10% WATER/90% D2O, 200 MICROM DSS, 0.02% NAN3 | 150 mM | 8.8 | 1.0 atm | 298.0 | ||
2 | 1H-13C HSQC | 10% WATER/90% D2O, 200 MICROM DSS, 0.02% NAN3 | 150 mM | 8.8 | 1.0 atm | 298.0 | ||
3 | 1H-15N NOESY | 10% WATER/90% D2O, 200 MICROM DSS, 0.02% NAN3 | 150 mM | 8.8 | 1.0 atm | 298.0 | ||
4 | 1H-13C NOESY | 10% WATER/90% D2O, 200 MICROM DSS, 0.02% NAN3 | 150 mM | 8.8 | 1.0 atm | 298.0 | ||
5 | CBCACONH | 10% WATER/90% D2O, 200 MICROM DSS, 0.02% NAN3 | 150 mM | 8.8 | 1.0 atm | 298.0 | ||
6 | HNCACB | 10% WATER/90% D2O, 200 MICROM DSS, 0.02% NAN3 | 150 mM | 8.8 | 1.0 atm | 298.0 | ||
7 | CCCONH | 10% WATER/90% D2O, 200 MICROM DSS, 0.02% NAN3 | 150 mM | 8.8 | 1.0 atm | 298.0 | ||
8 | H(CCO)NH | 10% WATER/90% D2O, 200 MICROM DSS, 0.02% NAN3 | 150 mM | 8.8 | 1.0 atm | 298.0 | ||
9 | 1H-15N TOCSY | 10% WATER/90% D2O, 200 MICROM DSS, 0.02% NAN3 | 150 mM | 8.8 | 1.0 atm | 298.0 | ||
10 | AROMATIC 1H-13C TROSY | 10% WATER/90% D2O, 200 MICROM DSS, 0.02% NAN3 | 150 mM | 8.8 | 1.0 atm | 298.0 | ||
11 | HBCBCGCDCEHE | 10% WATER/90% D2O, 200 MICROM DSS, 0.02% NAN3 | 150 mM | 8.8 | 1.0 atm | 298.0 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
DISTANCE GEOMETRY, SIMULATED ANNEALING | STRUCTURES WERE CALCULATED USING THE SCRIPTS FROM THE RECOORD DATABASE | CNS |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | LOWEST ENERGY |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (n/a) |
Additional NMR Experimental Information | |
---|---|
Details | NONE |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | CNS | 1.3 | BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,READ, RICE,SIMONSON,WARREN |
2 | structure solution | NMRPipe | ||
3 | structure solution | CcpNmr Analysis | ANALYSIS | |
4 | structure solution | UNIO | ||
5 | structure solution | CYANA | ||
6 | structure solution | CNS USING RECOORD SCRIPTS | SCRIPTS |