X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP7.529320-30% PEG 400, 0.1M HEPES, 0.01M MAGNESIUM SULPHATE, 11% 1,6-HEXANEDIOL , pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.5852.38

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 62.485α = 90
b = 122.139β = 90.76
c = 154.515γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 2102010-04-25MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONPHOTON FACTORY BEAMLINE BL-17A0.98Photon FactoryBL-17A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.375095.80.04314.62.78427080879-3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.372.44960.4741.72.4

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.37308427080879425690.30.193170.190030.25099RANDOM51.976
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-7.45-4.3326.08-18.63
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.815
r_dihedral_angle_4_deg21.583
r_dihedral_angle_3_deg19.47
r_dihedral_angle_1_deg6.929
r_scangle_it3.713
r_scbond_it2.334
r_angle_refined_deg1.651
r_mcangle_it1.508
r_mcbond_it0.815
r_angle_other_deg0.654
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.815
r_dihedral_angle_4_deg21.583
r_dihedral_angle_3_deg19.47
r_dihedral_angle_1_deg6.929
r_scangle_it3.713
r_scbond_it2.334
r_angle_refined_deg1.651
r_mcangle_it1.508
r_mcbond_it0.815
r_angle_other_deg0.654
r_chiral_restr0.113
r_bond_refined_d0.016
r_gen_planes_refined0.007
r_bond_other_d0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms15828
Nucleic Acid Atoms
Solvent Atoms204
Heterogen Atoms74

Software

Software
Software NamePurpose
HKL-2000data collection
MOLREPphasing
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling