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Crystal structure of RsbX in complex with cobalt in space group P1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 8.5 298 20% PEG 1000, 0.1M Tris-HCl, 3mM CoCl2, pH 8.5, VAPOR DIFFUSION, temperature 298K
Crystal Properties Matthews coefficient Solvent content 1.99 38.29
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 33.108 α = 80.81 b = 41.614 β = 89.95 c = 68.806 γ = 71.08
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD KIRKPATRICK-BAEZ MIRRORS 2009-02-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL41XU 1.6047 SPring-8 BL41XU
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 50 91.2 0.072 12.7 7.9 34187 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.7 1.73 60.4 0.346 2.8 7.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.7 19.67 34167 1721 90.88 0.1716 0.17 0.1698 0.2023 0.2019 RANDOM 22.9484
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.91 -1.09 0.32 0.81 -0.18 -0.96
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.022 r_dihedral_angle_4_deg 19.252 r_dihedral_angle_3_deg 13.614 r_dihedral_angle_1_deg 6.413 r_scangle_it 5.118 r_scbond_it 3.029 r_mcangle_it 1.829 r_angle_refined_deg 1.516 r_mcbond_it 0.979 r_chiral_restr 0.11
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.022 r_dihedral_angle_4_deg 19.252 r_dihedral_angle_3_deg 13.614 r_dihedral_angle_1_deg 6.413 r_scangle_it 5.118 r_scbond_it 3.029 r_mcangle_it 1.829 r_angle_refined_deg 1.516 r_mcbond_it 0.979 r_chiral_restr 0.11 r_bond_refined_d 0.016 r_gen_planes_refined 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3108 Nucleic Acid Atoms Solvent Atoms 372 Heterogen Atoms 2
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction BSS data collection HKL-2000 data reduction HKL-2000 data scaling SHELXS phasing