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Structure of U2AF65 variant with BrU3C2 DNA
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 277 1.6M Ammonium sulfate, 10% Dioxane, 0.1M MES pH 6.5, Deoxy-Big Chap, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 3.04 59.61
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 166.825 α = 90 b = 37.499 β = 125.35 c = 100.925 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2007-06-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CHESS BEAMLINE A1 0.987 CHESS A1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.19 50 99.3 0.098 18.8 5.3 26702 -1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.19 2.27 94.6 0.441 4 2473
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 2.19 41.88 25547 23012 2535 95.41 0.19525 0.1913 0.2088 0.23221 0.2427 RANDOM 41.296
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.24 0.79 -0.46 2.6
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.081 r_dihedral_angle_3_deg 14.15 r_dihedral_angle_4_deg 11.511 r_dihedral_angle_1_deg 5.19 r_scangle_it 1.95 r_angle_refined_deg 1.207 r_scbond_it 1.204 r_angle_other_deg 0.891 r_mcangle_it 0.687 r_mcbond_it 0.61
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.081 r_dihedral_angle_3_deg 14.15 r_dihedral_angle_4_deg 11.511 r_dihedral_angle_1_deg 5.19 r_scangle_it 1.95 r_angle_refined_deg 1.207 r_scbond_it 1.204 r_angle_other_deg 0.891 r_mcangle_it 0.687 r_mcbond_it 0.61 r_symmetry_vdw_other 0.278 r_symmetry_vdw_refined 0.192 r_nbd_refined 0.177 r_nbd_other 0.177 r_nbtor_refined 0.174 r_xyhbond_nbd_refined 0.159 r_symmetry_hbond_refined 0.11 r_mcbond_other 0.082 r_nbtor_other 0.079 r_chiral_restr 0.066 r_bond_refined_d 0.009 r_gen_planes_refined 0.003 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2686 Nucleic Acid Atoms 224 Solvent Atoms 156 Heterogen Atoms 110
Software Software Software Name Purpose HKL-2000 data collection REFMAC refinement DENZO data reduction SCALEPACK data scaling