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glmuC1 in complex with an antibacterial inhibitor
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.5 19-22% (w/v) PEG3350, 100mM PCTP pH 5.5 and 400mM ammonium sulfate, VAPOR DIFFUSION, HANGING DROP
Crystal Properties Matthews coefficient Solvent content 2.78 55.83
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 80.526 α = 90 b = 80.526 β = 90 c = 139.85 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU FR-E+ DW
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 69.84 3 2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.9 69.84 38936 1945 96.4 0.1881 0.2173 0.2281 RANDOM 26.32
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.02 -0.01 -0.02 0.03
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.618 r_dihedral_angle_4_deg 14.311 r_dihedral_angle_3_deg 13.412 r_dihedral_angle_1_deg 6.344 r_scangle_it 3.447 r_scbond_it 2.247 r_angle_refined_deg 1.396 r_mcangle_it 1.102 r_angle_other_deg 0.866 r_mcbond_it 0.84
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.618 r_dihedral_angle_4_deg 14.311 r_dihedral_angle_3_deg 13.412 r_dihedral_angle_1_deg 6.344 r_scangle_it 3.447 r_scbond_it 2.247 r_angle_refined_deg 1.396 r_mcangle_it 1.102 r_angle_other_deg 0.866 r_mcbond_it 0.84 r_symmetry_vdw_other 0.291 r_nbd_other 0.207 r_mcbond_other 0.199 r_nbd_refined 0.195 r_nbtor_refined 0.172 r_xyhbond_nbd_refined 0.159 r_symmetry_vdw_refined 0.132 r_symmetry_hbond_refined 0.125 r_chiral_restr 0.08 r_nbtor_other 0.079 r_bond_refined_d 0.013 r_gen_planes_refined 0.005 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3294 Nucleic Acid Atoms Solvent Atoms 388 Heterogen Atoms 80
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction CrystalClear data collection d*TREK data reduction d*TREK data scaling AMoRE phasing