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Structure of the shwanavidin-biotin complex
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 MICROBATCH 293 1.0M NaKPO4, pH range of 6.6-6.9, microbatch, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.99 38.14
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.725 α = 90 b = 56.031 β = 90 c = 86.62 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2009-04-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 0.875 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.45 47.04 99.8 37616 1 1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.45 47 35673 35673 1880 99.77 0.16344 0.16197 0.161 0.19 0.1913 RANDOM 12.396
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.38 -0.01 0.39
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.206 r_dihedral_angle_3_deg 10.856 r_dihedral_angle_1_deg 6.648 r_dihedral_angle_4_deg 6.22 r_sphericity_free 4.438 r_scangle_it 3.319 r_sphericity_bonded 2.75 r_scbond_it 2.58 r_mcangle_it 1.795 r_angle_refined_deg 1.546
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.206 r_dihedral_angle_3_deg 10.856 r_dihedral_angle_1_deg 6.648 r_dihedral_angle_4_deg 6.22 r_sphericity_free 4.438 r_scangle_it 3.319 r_sphericity_bonded 2.75 r_scbond_it 2.58 r_mcangle_it 1.795 r_angle_refined_deg 1.546 r_rigid_bond_restr 1.511 r_mcbond_it 1.209 r_symmetry_hbond_refined 0.461 r_nbtor_refined 0.302 r_nbd_refined 0.223 r_symmetry_vdw_refined 0.201 r_xyhbond_nbd_refined 0.137 r_chiral_restr 0.107 r_bond_refined_d 0.012 r_gen_planes_refined 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1800 Nucleic Acid Atoms Solvent Atoms 197 Heterogen Atoms 50
Software Software Software Name Purpose HKL-2000 data collection PHASER phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling