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Structural analysis of protein folding by the Methanococcus jannaschii chaperone FKBP26
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 hanging drop 298 15% PMME550, 100NaCl, pH 100 mM BICINE, pH 9.0, hanging drop, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.59 52.48
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.532 α = 90 b = 65.199 β = 90 c = 148.616 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD 2000-07-01 M MAD 2 1 x-ray 100 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X4A NSLS X4A 2 SYNCHROTRON NSLS BEAMLINE X4A NSLS X4A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 2.2 19.84 25822
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.2 19.84 24476 1314 100 0.2289 0.2265 0.2248 0.2736 0.2668 RANDOM 43.025
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.1 -0.49 -1.61
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.952 r_dihedral_angle_3_deg 16.197 r_dihedral_angle_4_deg 8.078 r_dihedral_angle_1_deg 5.498 r_scangle_it 3.705 r_scbond_it 2.131 r_mcangle_it 1.488 r_angle_refined_deg 1.283 r_mcbond_it 0.784 r_chiral_restr 0.08
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.952 r_dihedral_angle_3_deg 16.197 r_dihedral_angle_4_deg 8.078 r_dihedral_angle_1_deg 5.498 r_scangle_it 3.705 r_scbond_it 2.131 r_mcangle_it 1.488 r_angle_refined_deg 1.283 r_mcbond_it 0.784 r_chiral_restr 0.08 r_bond_refined_d 0.013 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3507 Nucleic Acid Atoms Solvent Atoms 179 Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SOLVE phasing RESOLVE phasing REFMAC refinement PDB_EXTRACT data extraction